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1

Steady state protein levels in Geobacter metallireducens grown with iron (III) citrate or nitrate as terminal electron acceptor

Angela J. Ahrendt, Sandra L. Tollaksen, Carl Lindberg, Wenhong Zhu, John R. Yates III, Kelly P. Nevin, György Babnigg, Derek R. Lovley, Carol S. Giometti

Journal:

Year:

2007

Language:

english

File:

PDF, 365 KB

english, 2007

2

Structural modifications of Methanococcus jannaschii flagellin proteins revealed by proteome analysis

Carol S. Giometti, Claudia I. Reich, Sandra L. Tollaksen, Gyorgy Babnigg, Hanjo Lim, John R. Yates III, Gary J. Olsen

Journal:

Year:

2001

Language:

english

File:

PDF, 155 KB

english, 2001

3

Expression and phosphorylation of NHE1 in wild-type and transformed human and rodent fibroblasts

Rebecca L. McSwine, Gyorgy Babnigg, Mark W. Musch, Eugene B. Chang, Mitchel L. Villereal

Journal:

Journal of Cellular Physiology

Year:

1994

Language:

english

File:

PDF, 863 KB

english, 1994

4

Efficient recognition of protein fold at low sequence identity by conservative application of Psi-BLAST: application

F. J. Stevens, C. Kuemmel, G. Babnigg, F. R. Collart

Journal:

Journal of Molecular Recognition

Year:

2005

Language:

english

File:

PDF, 333 KB

english, 2005

5

Template-based recognition of protein fold within the midnight and twilight zones of protein sequence similarity

Mono Pirun, Gyorgy Babnigg, Fred J. Stevens

Journal:

Journal of Molecular Recognition

Year:

2005

Language:

english

File:

PDF, 482 KB

english, 2005

6

Global analysis of a “simple” proteome: Methanococcus jannaschii

Carol S Giometti, Claudia Reich, Sandra Tollaksen, Gyorgy Babnigg, Hanjo Lim, Wenhong Zhu, John Yates III, Gary Olsen

Journal:

Journal of Chromatography B

Year:

2002

Language:

english

File:

PDF, 753 KB

english, 2002

7

ProteomeWeb: A web-based interface for the display and interrogation of proteomes

György Babnigg, Carol S. Giometti

Journal:

Year:

2003

Language:

english

File:

PDF, 1.19 MB

english, 2003

8

A database of unique protein sequence identifiers for proteome studies

György Babnigg, Carol S. Giometti

Journal:

Year:

2006

Language:

english

File:

PDF, 581 KB

english, 2006

9

The Gel Electrophoresis Markup Language (GelML) from the Proteomics Standards Initiative

Frank Gibson, Christine Hoogland, Salvador Martinez-Bartolomé, J. Alberto Medina-Aunon, Juan Pablo Albar, Gyorgy Babnigg, Anil Wipat, Henning Hermjakob, Jonas S. Almeida, Romesh Stanislaus, Norman W.

Journal:

Year:

2010

Language:

english

File:

PDF, 331 KB

english, 2010

10

VII. Rätselhafte Durchtrennung einer Dünndarmschlinge im Verlaufe einer Bauchfellentzündung

Journal:

Langenbeck's Archives of Surgery

Year:

1929

Language:

german

File:

PDF, 253 KB

german, 1929

11

Predicting protein crystallization propensity from protein sequence

György Babnigg, Andrzej Joachimiak

Journal:

Journal of Structural and Functional Genomics

Year:

2010

Language:

english

File:

PDF, 543 KB

english, 2010

12

Guidelines for reporting the use of gel electrophoresis in proteomics

Gibson, Frank, Anderson, Leigh, Babnigg, Gyorgy, Baker, Mark, Berth, Matthias, Binz, Pierre-Alain, Borthwick, Andy, Cash, Phil, Day, Billy W, Friedman, David B

Journal:

Nature Biotechnology

Year:

2008

Language:

english

File:

PDF, 157 KB

english, 2008

13

Cell-to-cell variation in store-operated calcium entry in HEK-293 cells and its impact on the interpretation of data from stable clones expressing exogenous calcium channels

G. Babnigg, B. Heller, M.L. Villereal

Journal:

Year:

2000

Language:

english

File:

PDF, 374 KB

english, 2000

14

Primary structure-based function characterization of BRCT domain replicates in BRCA1

Yinghua Chen, Stanley Borowicz, James Fackenthal, Frank R. Collart, Elizabeth Myatt, Shiu Moy, Gyorgy Babnigg, Rosemarie Wilton, William E. Boernke, Marianne Schiffer, Fred J. Stevens, Olufunmilayo I.

Journal:

Biochemical and Biophysical Research Communications

Year:

2006

Language:

english

File:

PDF, 268 KB

english, 2006

15

Structural and Functional Characterization of Microcin C Resistance Peptidase MccF from Bacillus anthracis

Boguslaw Nocek, Anton Tikhonov, Gyorgy Babnigg, Minyi Gu, Min Zhou, Kira S. Makarova, Gaston Vondenhoff, Arthur Van Aerschot, Keehwan Kwon, Wayne F. Anderson, Konstantin Severinov, Andrzej Joachimiak

Journal:

Journal of Molecular Biology

Year:

2012

Language:

english

File:

PDF, 2.69 MB

english, 2012

16

High-throughput protein purification and quality assessment for crystallization

Youngchang Kim, Gyorgy Babnigg, Robert Jedrzejczak, William H. Eschenfeldt, Hui Li, Natalia Maltseva, Catherine Hatzos-Skintges, Minyi Gu, Magdalena Makowska-Grzyska, Ruiying Wu, Hao An, Gekleng Chhor

Journal:

Year:

2011

Language:

english

File:

PDF, 2.19 MB

english, 2011

17

Novel -glucosidase from human gut microbiome: substrate specificities and their switch

Tan, K., Tesar, C., Wilton, R., Keigher, L., Babnigg, G., Joachimiak, A.

Journal:

The FASEB Journal

Year:

2010

Language:

english

File:

PDF, 801 KB

english, 2010

18

Global Proteomic Analysis of the Chromate Response in Arthrobacter sp. Strain FB24

Henne, Kristene L., Turse, Joshua E., Nicora, Carrie D., Lipton, Mary S., Tollaksen, Sandra L., Lindberg, Carl, Babnigg, Gyorgy, Giometti, Carol S., Nakatsu, Cindy H., Thompson, Dorothea K., Konopka,

Journal:

Journal of Proteome Research

Year:

2009

Language:

english

File:

PDF, 2.25 MB

english, 2009

19

Insight into the sporulation phosphorelay: Crystal structure of the sensor domain of Bacillus subtilis histidine kinase, KinD

Wu, R., Gu, M., Wilton, R., Babnigg, G., Kim, Y., Pokkuluri, P. R., Szurmant, H., Joachimiak, A., Schiffer, M.

Journal:

Protein Science

Year:

2013

Language:

english

File:

PDF, 582 KB

english, 2013

20

RsaM: a transcriptional regulator of Burkholderia spp. with novel fold

Michalska, Karolina, Chhor, Gekleng, Clancy, Shonda, Jedrzejczak, Robert, Babnigg, Gyorgy, Winans, Stephen C., Joachimiak, Andrzej

Journal:

Year:

2014

Language:

english

File:

PDF, 1003 KB

english, 2014

21

The crystal structure of BlmI as a model for nonribosomal peptide synthetase peptidyl carrier proteins

Lohman, Jeremy R., Ma, Ming, Cuff, Marianne E., Bigelow, Lance, Bearden, Jessica, Babnigg, Gyorgy, Joachimiak, Andrzej, Phillips, George N., Shen, Ben

Journal:

Proteins: Structure, Function, and Bioinformatics

Year:

2014

Language:

english

File:

PDF, 745 KB

english, 2014

22

Analysis of periplasmic sensor domains from Anaeromyxobacter dehalogenans 2CP-C: Structure of one sensor domain from a histidine kinase and another from a chemotaxis protein

Pokkuluri, P. Raj, Dwulit-Smith, Jeff, Duke, Norma E., Wilton, Rosemarie, Mack, Jamey C., Bearden, Jessica, Rakowski, Ella, Babnigg, Gyorgy, Szurmant, Hendrik, Joachimiak, Andrzej, Schiffer, Marianne

Journal:

MicrobiologyOpen

Year:

2013

Language:

english

File:

PDF, 574 KB

english, 2013

23

Tyrosine phosphatase and cytochrome P450 activity are critical in regulating store-operated calcium channels in human fibroblasts

Lee, Kyung-Mi, Son, Sang-Wook, Babnigg, Gyorgy, Villereal, Mitchel L

Journal:

Experimental and Molecular Medicine

Year:

2006

Language:

english

File:

PDF, 1.04 MB

english, 2006

24

Induction of Osmoadaptive Mechanisms and Modulation of Cellular Physiology HelpBacillus licheniformisStrain SSA 61 Adapt to Salt Stress

Paul, Sangeeta, Aggarwal, Chetana, Thakur, Jyoti Kumar, Bandeppa, G. S., Khan, Md. Aslam, Pearson, Lauren M., Babnigg, Gyorgy, Giometti, Carol S., Joachimiak, Andrzej

Journal:

Current Microbiology

Year:

2015

Language:

english

File:

PDF, 380 KB

english, 2015

25

Structure of a cupin protein Plu4264 from Photorhabdus luminescens subsp. laumondii TTO1 at 1.35 Å resolution

Weerth, R. Sophia, Michalska, Karolina, Bingman, Craig A., Yennamalli, Ragothaman M., Li, Hui, Jedrzejczak, Robert, Wang, Fengbin, Babnigg, Gyorgy, Joachimiak, Andrzej, Thomas, Michael G., Phillips, G

Journal:

Proteins: Structure, Function, and Bioinformatics

Year:

2015

Language:

english

File:

PDF, 386 KB

english, 2015

26

The Role of pp60c- src in the Regulation of Calcium Entry via Store-operated Calcium Channels

Babnigg, G., Bowersox, S. R., Villereal, M. L.

Journal:

Journal of Biological Chemistry

Year:

1997

Language:

english

File:

PDF, 610 KB

english, 1997

27

The Role of Endogenous Human Trp4 in Regulating Carbachol-induced Calcium Oscillations in HEK-293 Cells

Wu, Xiaoyan, Babnigg, György, Zagranichnaya, Tatiana, Villereal, Mitchel L.

Journal:

Journal of Biological Chemistry

Year:

2002

Language:

english

File:

PDF, 813 KB

english, 2002

28

Differential Tyrosine Phosphorylation of Plasma Membrane Ca2+-ATPase and Regulation of Calcium Pump Activity by Carbachol and Bradykinin

Babnigg, G., Zagranichnaya, T., Wu, X., Villereal, M. L.

Journal:

Journal of Biological Chemistry

Year:

2003

Language:

english

File:

PDF, 758 KB

english, 2003

29

Extracytoplasmic PAS-Like Domains Are Common in Signal Transduction Proteins

Chang, C., Tesar, C., Gu, M., Babnigg, G., Joachimiak, A., Pokkuluri, P. R., Szurmant, H., Schiffer, M.

Journal:

Journal of Bacteriology

Year:

2010

Language:

english

File:

PDF, 400 KB

english, 2010

30

The structure of a contact-dependent growth-inhibition (CDI) immunity protein from Neisseria meningitidis MC58

Tan, Kemin, Johnson, Parker M., Stols, Lucy, Boubion, Bryan, Eschenfeldt, William, Babnigg, Gyorgy, Hayes, Christopher S., Joachimiak, Andrezj, Goulding, Celia W.

Journal:

Acta Crystallographica Section F Structural Biology Communications

Year:

2015

Language:

english

File:

PDF, 1.18 MB

english, 2015

31

Global profiling of Shewanella oneidensis MR-1: Expression of hypothetical genes and improved functional annotations

Kolker, E., Picone, A. F., Galperin, M. Y., Romine, M. F., Higdon, R., Makarova, K. S., Kolker, N., Anderson, G. A., Qiu, X., Auberry, K. J., Babnigg, G., Beliaev, A. S., Edlefsen, P., Elias, D. A., G

Journal:

Proceedings of the National Academy of Sciences

Year:

2005

Language:

english

File:

PDF, 273 KB

english, 2005

32

GH1-family 6-P-β-glucosidases from human microbiome lactic acid bacteria

Michalska, Karolina, Tan, Kemin, Li, Hui, Hatzos-Skintges, Catherine, Bearden, Jessica, Babnigg, Gyorgy, Joachimiak, Andrzej

Journal:

Acta Crystallographica Section D Biological Crystallography

Year:

2013

Language:

english

File:

PDF, 1.33 MB

english, 2013

33

GELBANK: a database of annotated two-dimensional gel electrophoresis patterns of biological systems with completed genomes

Journal:

Nucleic Acids Research

Year:

2004

Language:

english

File:

PDF, 139 KB

english, 2004

34

Structural and evolutionary relationships of “AT-less” type I polyketide synthase ketosynthases

Lohman, Jeremy R., Ma, Ming, Osipiuk, Jerzy, Nocek, Boguslaw, Kim, Youngchang, Chang, Changsoo, Cuff, Marianne, Mack, Jamey, Bigelow, Lance, Li, Hui, Endres, Michael, Babnigg, Gyorgy, Joachimiak, Andr

Journal:

Proceedings of the National Academy of Sciences

Year:

2015

Language:

english

File:

PDF, 2.20 MB

english, 2015

35

Gene selection and cloning approaches for co-expression and production of recombinant protein–protein complexes

Babnigg, György, Jedrzejczak, Robert, Nocek, Boguslaw, Stein, Adam, Eschenfeldt, William, Stols, Lucy, Marshall, Norman, Weger, Alicia, Wu, Ruiying, Donnelly, Mark, Joachimiak, Andrzej

Journal:

Journal of Structural and Functional Genomics

Year:

2015

Language:

english

File:

PDF, 8.11 MB

english, 2015

36

Structural Characterization of CalS8, a TDP-α-d-Glucose Dehydrogenase Involved in Calicheamicin Aminodideoxypentose Biosynthesis

Singh, Shanteri, Michalska, Karolina, Bigelow, Lance, Endres, Michael, Kharel, Madan K., Babnigg, Gyorgy, Yennamalli, Ragothaman M., Bingman, Craig A., Joachimiak, Andrzej, Thorson, Jon S., Phillips,

Journal:

Journal of Biological Chemistry

Year:

2015

Language:

english

File:

PDF, 2.95 MB

english, 2015

37

Crystal Structure of the Zorbamycin-Binding Protein ZbmA, the Primary Self-Resistance Element in Streptomyces flavoviridis ATCC21892

Rudolf, Jeffrey D., Bigelow, Lance, Chang, Changsoo, Cuff, Marianne E., Lohman, Jeremy R., Chang, Chin-Yuan, Ma, Ming, Yang, Dong, Clancy, Shonda, Babnigg, Gyorgy, Joachimiak, Andrzej, Phillips, Georg

Journal:

Year:

2015

Language:

english

File:

PDF, 7.22 MB

english, 2015

38

WrpA is an atypical flavodoxin-family protein under regulatory control of the Brucella abortus general stress response system

Herrou, Julien, Czyż, Daniel M., Willett, Jonathan W., Kim, Hye-Sook, Chhor, Gekleng, Babnigg, Gyorgy, Kim, Youngchang, Crosson, Sean

Journal:

Journal of Bacteriology

Year:

2016

Language:

english

File:

PDF, 5.59 MB

english, 2016

39

Structure of a cupin protein Plu4264 from Photorhabdus luminescens subsp. laumondii TTO1 at 1.35 Å resolution

Sophia Weerth, R., Michalska, Karolina, Bingman, Craig A., Yennamalli, Ragothaman M., Li, Hui, Jedrzejczak, Robert, Wang, Fengbin, Babnigg, Gyorgy, Joachimiak, Andrzej, Thomas, Michael G., Phillips, G

Journal:

Proteins: Structure, Function, and Bioinformatics

Year:

2015

Language:

english

File:

PDF, 43 KB

english, 2015

40

Co-occurrence of analogous enzymes determines evolution of a novel ( )8-isomerase sub-family after non-conserved mutations in flexible loop

Verduzco-Castro, E. A., Michalska, K., Endres, M., Juarez-Vazquez, A. L., Noda-Garcia, L., Chang, C., Henry, C. S., Babnigg, G., Joachimiak, A., Barona-Gomez, F.

Journal:

Biochemical Journal

Year:

2016

Language:

english

File:

PDF, 1.09 MB

english, 2016

41

How Aromatic Compounds Block DNA Binding of HcaR Catabolite Regulator

Kim, Youngchang, Joachimiak, Grazyna, Bigelow, Lance, Babnigg, Gyorgy, Joachimiak, Andrzej

Journal:

Journal of Biological Chemistry

Year:

2016

Language:

english

File:

PDF, 1.12 MB

english, 2016

42

Structural characterization of AtmS13, a putative sugar aminotransferase involved in indolocarbazole AT2433 aminopentose biosynthesis

Singh, Shanteri, Kim, Youngchang, Wang, Fengbin, Bigelow, Lance, Endres, Michael, Kharel, Madan K., Babnigg, Gyorgy, Bingman, Craig A., Joachimiak, Andrzej, Thorson, Jon S., Phillips, George N.

Journal:

Proteins: Structure, Function, and Bioinformatics

Year:

2015

Language:

english

File:

PDF, 417 KB

english, 2015

43

Structure of the ent -Copalyl Diphosphate Synthase PtmT2 from Streptomyces platensis CB00739, a Bacterial Type II Diterpene Synthase

Rudolf, Jeffrey D., Dong, Liao-Bin, Cao, Hongnan, Hatzos-Skintges, Catherine, Osipiuk, Jerzy, Endres, Michael, Chang, Chin-Yuan, Ma, Ming, Babnigg, Gyorgy, Joachimiak, Andrzej, Phillips, George N., Sh

Journal:

Journal of the American Chemical Society

Year:

2016

Language:

english

File:

PDF, 1.12 MB

english, 2016

44

Crystal Structures of SgcE6 and SgcC, the Two-Component Monooxygenase That Catalyzes Hydroxylation of a Carrier Protein-Tethered Substrate during the Biosynthesis of the Enediyne Antitumor Antibiotic C-1027 in Streptomyces globisporus

Chang, Chin-Yuan, Lohman, Jeremy R., Cao, Hongnan, Tan, Kemin, Rudolf, Jeffrey D., Ma, Ming, Xu, Weijun, Bingman, Craig A., Yennamalli, Ragothaman M., Bigelow, Lance, Babnigg, Gyorgy, Yan, Xiaohui, Jo

Journal:

Year:

2016

Language:

english

File:

PDF, 2.67 MB

english, 2016

45

Structural modifications of Methanococcus jannaschii flagellin proteins revealed by proteome analysis

Giometti, Carol, Tollaksen, Sandra, Babnigg, Gyorgy, Reich, Claudia, Olsen, Gary, Lim, Hanjo, Yates, III, John

Journal:

European Journal of Mass Spectrometry

Year:

2001

Language:

english

File:

PDF, 599 KB

english, 2001

46

Conserved ABC Transport System Regulated by the General Stress Response Pathways of Alpha- and Gammaproteobacteria

Herrou, Julien, Willett, Jonathan W., Czyż, Daniel M., Babnigg, Gyorgy, Kim, Youngchang, Crosson, Sean, Stock, Ann M.

Journal:

Journal of Bacteriology

Year:

2017

Language:

english

File:

PDF, 2.87 MB

english, 2017

47

A novel signal transduction protein: Combination of solute binding and tandem PAS-like sensor domains in one polypeptide chain

Wu, R., Wilton, R., Cuff, M. E., Endres, M., Babnigg, G., Edirisinghe, J. N., Henry, C. S., Joachimiak, A., Schiffer, M., Pokkuluri, P. R.

Journal:

Protein Science

Year:

2017

Language:

english

File:

PDF, 2.52 MB

english, 2017

48

The CDI toxin of Yersinia kristensenii is a novel bacterial member of the RNase A superfamily

Batot, Gaëlle, Michalska, Karolina, Ekberg, Greg, Irimpan, Ervin M., Joachimiak, Grazyna, Jedrzejczak, Robert, Babnigg, Gyorgy, Hayes, Christopher S., Joachimiak, Andrzej, Goulding, Celia W.

Journal:

Nucleic Acids Research

Year:

2017

Language:

english

File:

PDF, 4.05 MB

english, 2017

49

Insights into PG-Binding, Conformational Change, and Dimerization of the OmpA C-terminal Domains from Salmonella enterica serovar Typhimurium and Borrelia burgdorferi

Tan, Kemin, Deatherage Kaiser, Brooke L., Wu, Ruiying, Cuff, Marianne, Fan, Yao, Bigelow, Lance, Jedrzejczak, Robert P., Adkins, Joshua N., Cort, John R., Babnigg, Gyorgy, Joachimiak, Andrzej

Journal:

Protein Science

Year:

2017

Language:

english

File:

PDF, 1.80 MB

english, 2017

50

Structural dynamics of a methionine γ -lyase for calicheamicin biosynthesis: Rotation of the conserved tyrosine stacking with pyridoxal phosphate

Cao, Hongnan, Tan, Kemin, Wang, Fengbin, Bigelow, Lance, Yennamalli, Ragothaman M., Jedrzejczak, Robert, Babnigg, Gyorgy, Bingman, Craig A., Joachimiak, Andrzej, Kharel, Madan K., Singh, Shanteri, Tho

Journal:

Structural Dynamics

Year:

2016

Language:

english

File:

PDF, 5.99 MB

english, 2016